Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919555.1_cds_XP_016468744.1_61346
CDS Infomation

[gene=LOC107791236] [db_xref=GeneID:107791236] [protein=reticulon-like protein B21] [protein_id=XP_016468744.1] [location=join(33132..34176,34629..34688,34792..34894,35006..35083,35826..35973,36088..36157,36796..36861,38672..38794,39268..39446)] [gbkey=CDS]
Sequence

ATGGAAGTGGTTAATAAGAGAAGGAGCAAAATTTCAAGAAATGGTGTAATGTCAGGTTCT
GTATGGGAAAATAGGATGAAATATGATGAAGTCAAAGGTGGGATCAAAGTATATAGCAAC
AGTGAAAAAGAAGAAGAAACCCCAGAAGTAAAAAATGATGAGAAAACTAGTACTACTACT
ACTATAATTAGTACTACTAGTGAAACAAATCAAGTAGACAAAAAGTTGAAAATGGGGTCA
AAATCCAATCTTGGTGTTGGTGGTGTGATGAGTGGCAAGAGAAAAACTTGGAAATCTGAG
AGTAATTTTGAAGGGAACCCAATTCAGATTTCAAGAAAAAGATCTGAATTGAGCAAGAAT
TTGGATGAACAGTGTAAAGAATTGAGTACAGTTTCAACTGAAGAAATGAAGAAAAGTTCA
ATTCAGAACAAGAAATCAAGTGTATTATTAAGGAAAGTGAAATCAGAGGCTAATAATGGA
GGAAAAGAGGATGAAAATGAGAAGAATTCTGAATTAAGGAAAGTAAAATCTATGTCTGTT
AATGGGAATTTGAGGAATTCAGTTCAGCTGGTGAAAGCAAAATCAGTTACAAGTAAAGAA
GTTGAAGAGAAATGTAAGAATTTTGAGGAAAATAAGGTTGTTGTTGTTGGTGTTGGTGTA
GAGGAGTCAAAAAAGAATCTTGAAAATCAAGAAAATTGTAAAGAATTTGGTATATGTGAA
GAGAAAGTTATAACAAGCAATGAAGAAAATTGTAAAGAATCTCAAGTCAAGTGTAGTAAT
AAAGAAAAGTTGAATCTTGAAAATGAAGAAAATGAAGAAGAATTGGATGAGGTTTTTGAT
GAGGAAATTGAAAAGGAATTAAGTGTTGATGTTAAAGAGATTAATGTAGCAGAAAATAAG
CCTAAAAAGGTTGTAATTGAAGAGAAAAAACTTCAAATTAGCAATGAAAAATCAGTTCCC
ATTTCTCCAATTATCAAGAAACAGTCTCCTCCAATTCCAGGCCAAGCCAAAATTCATCTT
CAAAGTCCAACAAGAACCAAATCAGTTCCAACTTCAGATGAATTTCACACAATTCCAAGA
CAACATAGCAAATTACAAAGCTTTGTTGATTTGGTAATGTGGAGAGATGCATCAAAATCA
GCATTAATCTTTGGAATTGGAACTTTTGTCATCATTTCATCTTCATATACTCAAGATCTC
AGTATCAGCTTCATTTCTGTTCTTTCCTACTTGGGTCTGGTCTATCTTGCTGCAATCTTT
CTCTTTAGATCCCTCAATATTCACAGGGGTGCCAATAATATAAATGAGTCAAGTGAATAT
ATAGTAGGAGAAGAAGAAGCAATGTGGATACTGAAATTGATACTGCCTTACATAAATGAA
TGTCTCTTGAAAATTAGAGCCCTTTTTTCTGGGGATCCTGCTACTACAATGAAGATGGCA
GTTCTGCTGTTTATTTTGGCTAGATGTGGCAGCTCCATAACTATTTGGAAAATGTCCAAA
TTAGGCTTTTTTGGAGTTTTCATTGTACCAAAAGTCTGTTCTTCTTATTCCACTCAGTTA
ACTGCCTATGGTACATTTTGGATTAGACGCTTTCGAGATGCTTGGGAATCATGTACTCAC
AAGAAAGCAGTTGCATTTGCAATATTCACACTCGTTTGGAATTTATCTTCAATTGCTGCT
AGAATTTGGGCAGTTTTTATGTTGTATGTGGGATTTAGGTACTACCAACAGAAATTGATG
AAAGAAGGCTGGGTAAGTGAAGAAGAAACTACAAAAGTAGAGGATTATTGGCAAGGAAAA
ATTGGAGGACAAAGACAAATTGGGAGAAGATCCACTATGGTGGAAACAAGAAAGCAAAAG
AAAACAATTTAA

Peptide Sequence

PEP ID

XP_016468744.1
PEP Infomation

PREDICTED: reticulon-like protein B21 [Nicotiana tabacum]
Sequence

MEVVNKRRSKISRNGVMSGSVWENRMKYDEVKGGIKVYSNSEKEEETPEVKNDEKTSTTT
TIISTTSETNQVDKKLKMGSKSNLGVGGVMSGKRKTWKSESNFEGNPIQISRKRSELSKN
LDEQCKELSTVSTEEMKKSSIQNKKSSVLLRKVKSEANNGGKEDENEKNSELRKVKSMSV
NGNLRNSVQLVKAKSVTSKEVEEKCKNFEENKVVVVGVGVEESKKNLENQENCKEFGICE
EKVITSNEENCKESQVKCSNKEKLNLENEENEEELDEVFDEEIEKELSVDVKEINVAENK
PKKVVIEEKKLQISNEKSVPISPIIKKQSPPIPGQAKIHLQSPTRTKSVPTSDEFHTIPR
QHSKLQSFVDLVMWRDASKSALIFGIGTFVIISSSYTQDLSISFISVLSYLGLVYLAAIF
LFRSLNIHRGANNINESSEYIVGEEEAMWILKLILPYINECLLKIRALFSGDPATTMKMA
VLLFILARCGSSITIWKMSKLGFFGVFIVPKVCSSYSTQLTAYGTFWIRRFRDAWESCTH
KKAVAFAIFTLVWNLSSIAARIWAVFMLYVGFRYYQQKLMKEGWVSEEETTKVEDYWQGK
IGGQRQIGRRSTMVETRKQKKTI

Transcript Sequence

Gene sequence data has not been registered.